By Ashley Bannister: Mother of Pearl*
Nikon A1R

The Nikon A1R is an inverted confocal microscope with two standard PMT detectors and two standard GAaSP detectors. A separate 32 channel spectral detector, and transmitted light PMT detector are also available. The system is inside an environmental chamber with temperature, CO2 and humidity control.

Microscope

  • Inverted TiE Stand
  • Motorized x-y stage
  • Piezo z stage
  • Perfect Focusing System

Nikon objectives

The MIF has a range of Nikon objectives that can be installed on Nikon microscopes. Please contact the MIF team if you need a specific objective installed on a microscope prior to your imaging session.

 

Objectives NA Tech WD/mm Imm. PFS Material Ref.
4X Plan Apo 𝝺 0.2 BF 20 Air Y MRD00045
4X Plan Fluor DL F 0.13 PhL 16.4 Air N MRH20041
10X Plan Fluor DLL 0.3 Ph1 16 Air Y MRH10101
10X Plan Apochromat 𝝺 0.45 DIC 4 Air Y MRD00105
20x Plan Apo lambda DM 0.75 Ph2 1 Air Y MRD00205
20X Apo 𝝺S 0.95   0.95 Water Y MRD77200
20X Plan Fluor DM ELWD 0.45 Ph1 8.20 - 6.90 Air Y MRH08230
20X S Plan Fluor LWD 0.7   2.3 - 1.3 Air Y MRH08250
40X Plan Apochromat 𝝺DM  0.95 Ph2 0.21 Air Y MRD30405
40X S Plan Fluor ADM ELWD 0.6 Ph2 3.60 - 2.80 Air Y MRH48230
40X Apo 𝝺S chromatic correction:405-850nm 1.25   0.18 Water Y MRD77400
40X Plan Fluor H N2 1.3 DIC .24 Oil Y MRH01401
60X APlan Apochromat VC 1.2   0.29 Water Y MRD07602
60X Plan Apochromat 𝝺DM 1.4 DIC 0.13 Oil Y MRD31605
100X Plan Apochromat 𝝺  1.45   0.13 Oil Y MRD01905
100X Plan Apo 𝝺DM 1.45 Ph3 0.13 Oil Y MRD31905

Lasers

  • 405, 457, 514, 488, 561, 640 nm
     

Scanners

  • Galvano scanner up to 24 Hz
  • Resonant scanner up to 420 Hz (512 x 512)
     
Nikon A1R image processsed with denoise
Mouse kidney section labelled with DAPI (cyan), AlexaFluor 488 WGA (green) and AlexaFluor 568 Phalloidin (magenta) and acquired with a 20x/0.7 objective.

Software

NIS Elements including FRET module, JOBS for automated acquisition and real time analysis workflows, NIS.ai denoise and deconvolution algorithms for image processing.

*Mother of Pearl

Maximum intensity projection of whole placental organoid immunolabelled for E-Cadherin (orange), Human Leukocyte Antigen-G (chartreuse), Syndecan-1 (light blue), and counterstained with DAPI (pink). Placental organoids were retrieved from their matrix and grown in suspension for 12 days. Whole organoids were fixed, blocked, immunolabelled, and optically cleared. Whole organoids were mounted on slides and imaged to a depth of 60um using a Nikon A1R Confocal microscope using a 20X NA0.45 objective with 0.8um z-steps. Image was denoised using Denoise.Ai.